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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015400.1_6554_6703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6554 - 6703

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GGGTCCTCACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

68.8

43.8

Major BPS

72.4

0.56

73.5

32.5

Major PPT

67.1

0.39

57.8

38.5

Minor 5ss

33.1

-1.9

2.8

41.8

Minor BPS

46.8

-0.3

1.9

49.08

44.7

Associated Gene:

Gene:

AHDC1

Ensembl Gene ID:

ENSAPLG00000027176

Chromosome:

PEDO01015400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039668

353 - 7124

6772