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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015403.1_2787_2849_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2787 - 2849

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTGCA

5'SS Class:

major

3'SS Sequence:

GCGCGCCCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

GCCGCCTGACCG

Flanking Amino Acid:

RITDPEVLEQRYPVVLQRFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

62.4

38.2

Major BPS

51.1

0.03

1.2

39.9

Major PPT

58.1

0.18

0.9

46.6

36.7

Minor 5ss

26.6

-2.7

3.2

32.2

42.4

Minor BPS

44.6

-0.5

1.9

44.32

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018445

Chromosome:

PEDO01015403.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018738

2491 - 3467

977