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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015424.1_4257_5795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4257 - 5795

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGACGA

5'SS Class:

major

3'SS Sequence:

CCTTCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGATTTTTAGTC

Flanking Amino Acid:

KFKETPFVPIGMAGFVAVVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

41.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

81.4

0.71

0.7

76.6

25.4

Minor 5ss

26.4

-2.7

2.9

31.2

42.3

Minor BPS

0.17

1.5

63.24

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020632

Chromosome:

PEDO01015424.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025883

4154 - 6694

2541