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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015424.1_5931_6644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5931 - 6644

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TTTTGTCATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AGCTTTCTAATA

Flanking Amino Acid:

QGFVVGAITCGVLYSMVREY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.5

38.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.8

0.74

0.9

35.5

Minor 5ss

35.7

-1.6

2.9

43.1

38.2

Minor BPS

49.7

-0

1.6

58.26

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020632

Chromosome:

PEDO01015424.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025883

4154 - 6694

2541