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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015430.1_855_2167_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

855 - 2167

Intron Length:

1313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGCTCGG

5'SS Class:

weak_major

3'SS Sequence:

GCGGAATTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCGGAA

U12 Branch Point Sequence:

GGCTGCGGAATT

Flanking Amino Acid:

QRQQHRGKCSQLLQLEEEVL

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.3

41.9

46.6

Major BPS

46.8

-0.2

1.4

43.1

41.8

Major PPT

62.6

0.28

1.1

50.6

46.9

Minor 5ss

32.8

-2

3.2

40.5

45.7

Minor BPS

41.7

-0.5

2.3

57.97

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021999

Chromosome:

PEDO01015430.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044923

3 - 5266

5264