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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015458.1_604_807_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

604 - 807

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCTGGGACA

5'SS Class:

weak_major

3'SS Sequence:

AAGAACATGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGAACAT

U12 Branch Point Sequence:

TCTGCGTCACAC

Flanking Amino Acid:

ITGGKMNMNMLSTRVSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.4

61.2

37.4

Major BPS

48.8

-0

1.2

55.1

40.4

Major PPT

47.5

-0.1

1.1

33.8

40.6

Minor 5ss

19.6

-3.5

3.8

28.5

Minor BPS

38.9

-0.8

2.4

51.17

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016486

Chromosome:

PEDO01015458.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025894

405 - 830

426