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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015464.1_3421_3647_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3421 - 3647

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

GCACCCTCAGCT

Flanking Amino Acid:

GSLALESGDARPAVALSAIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.2

39.3

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

0.92

0.6

Minor 5ss

63.9

0.47

2.4

76.5

39.2

Minor BPS

48.7

-0

1.8

63.99

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019465

Chromosome:

PEDO01015464.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047182

347 - 4097

3751