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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015465.1_938_2189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

938 - 2189

Intron Length:

1252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CACGCCTCAGCC

Flanking Amino Acid:

RTDLTEARVQVWFQNRRAKW

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

71.1

0.48

0.8

61.7

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

45.8

-0.3

1.9

51.47

45.4

Associated Gene:

Gene:

ALX3

Ensembl Gene ID:

ENSAPLG00000029415

Chromosome:

PEDO01015465.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047775

136 - 3326

3191