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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015491.1_233_1989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

233 - 1989

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGCC

5'SS Class:

major

3'SS Sequence:

CTTTATTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TGTCTCTTTATT

Flanking Amino Acid:

AGRGGPAAAAEDRKLIRIVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

62.4

38.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

0.81

0.8

80.2

31.6

Minor 5ss

34.6

-1.7

3.8

50.4

46.4

Minor BPS

61.5

0.44

1.6

77.87

38.2

Associated Gene:

Gene:

NUDCD2

Ensembl Gene ID:

ENSAPLG00000013327

Chromosome:

PEDO01015491.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024140

21 - 3633

3613