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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015491.1_233_767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

233 - 767

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGCC

5'SS Class:

major

3'SS Sequence:

ATGTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTCCTGTTAAGT

Flanking Amino Acid:

LAVGGRQLLQGKLFDSTIAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

62.4

38.1

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

82.8

0.74

0.9

77.3

36.3

Minor 5ss

34.6

-1.7

3.8

50.4

46.4

Minor BPS

48.8

-0

2.3

72.32

44.9

Associated Gene:

Gene:

NUDCD2

Ensembl Gene ID:

ENSAPLG00000013327

Chromosome:

PEDO01015491.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040304

21 - 3633

3613

ENSAPLT00000013880

21 - 3633

3613