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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015495.1_3049_3452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3049 - 3452

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCGGG

5'SS Class:

major

3'SS Sequence:

CCCTGTCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

TTCACTTTGACT

Flanking Amino Acid:

YMRQSAALQQVLSTRIVAMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

47.1

Major BPS

74.1

0.6

66.7

39.9

Major PPT

67.7

0.4

0.9

64.9

35.4

Minor 5ss

31.2

-2.2

3.2

38.7

46.4

Minor BPS

72.5

0.79

1.2

83.69

37.5

Associated Gene:

Gene:

MED16

Ensembl Gene ID:

ENSAPLG00000006842

Chromosome:

PEDO01015495.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007105

339 - 5309

4971