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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015495.1_360_2925_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

360 - 2925

Intron Length:

2566

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCGATGGA

5'SS Class:

weak_major

3'SS Sequence:

GTTCCTGTTGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATGAA

U12 Branch Point Sequence:

CCTGCGTCACTT

Flanking Amino Acid:

ADAVRREYCMVTGYDWW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.2

56.5

37.3

Major BPS

54.1

0.1

1.1

45.7

37.1

Major PPT

56.8

0.15

1.7

41.2

Minor 5ss

16.8

-3.8

3.8

22.1

35.1

Minor BPS

39.5

-0.7

2.4

54.83

47.7

Associated Gene:

Gene:

MED16

Ensembl Gene ID:

ENSAPLG00000006842

Chromosome:

PEDO01015495.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007105

339 - 5309

4971