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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015495.1_4005_4164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4005 - 4164

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

CCAGTCTCAGCT

Flanking Amino Acid:

LYLLASLPNQGSPVRPGHSF

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

82.4

0.73

0.7

76.9

25.1

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

44.7

-0.3

1.8

56.08

46.3

Associated Gene:

Gene:

MED16

Ensembl Gene ID:

ENSAPLG00000006842

Chromosome:

PEDO01015495.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007105

339 - 5309

4971