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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015495.1_4358_4613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4358 - 4613

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTTCCATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTCTCTTTCACT

Flanking Amino Acid:

FRLLTKLWLCCREENHITEP

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.3

0.68

0.9

34.3

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

71.7

0.77

1.7

87.23

Associated Gene:

Gene:

MED16

Ensembl Gene ID:

ENSAPLG00000006842

Chromosome:

PEDO01015495.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007105

339 - 5309

4971