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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015495.1_4802_5146_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

4802 - 5146

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTCTCTTCC

5'SS Class:

weak_minor

3'SS Sequence:

TATTCTAGAAAAG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TATTCTAGAAAA

Flanking Amino Acid:

GKAPGLVGHTLPFFFLSRAP

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

45.4

-0.2

1.4

43.6

38.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

55.8

0.13

1.2

57.9

40.9

Minor 5ss

55.1

0.17

2.1

72.4

36.9

Minor BPS

51.1

0.03

1.8

68.21

37.2

Associated Gene:

Gene:

MED16

Ensembl Gene ID:

ENSAPLG00000006842

Chromosome:

PEDO01015495.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007105

339 - 5309

4971