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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015504.1_1999_2278_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1999 - 2278

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGGAGG

5'SS Class:

major

3'SS Sequence:

TTCCTGCCCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

TGTGGCACAGCC

Flanking Amino Acid:

MGFCSNGGRCH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

57.2

47.1

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

51.9

0.04

1.7

57.7

38.6

Minor 5ss

30.7

-2.2

3.3

36.5

42.6

Minor BPS

38.6

-0.8

2.2

52.45

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024017

Chromosome:

PEDO01015504.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021797

413 - 2281

1869