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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_10219_10316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10219 - 10316

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CATACTTGCACG

Flanking Amino Acid:

AELEGFAFYKVLRQYSNIEE

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

79.2

36.3

Major BPS

0.62

1.4

85.7

34.9

Major PPT

65.7

0.35

57.9

38.5

Minor 5ss

31.5

-2.1

2.4

34.9

40.7

Minor BPS

44.9

-0.5

49.91

43.9

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176