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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_11051_11421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11051 - 11421

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGAATTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TCCCTCTGAATT

Flanking Amino Acid:

QLNSCPGYTKEIAIRSCAEP

Intron Amino Acid Position:

765

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

68.2

0.41

61.6

39.5

Minor 5ss

30.2

-2.3

3.3

39.5

46.1

Minor BPS

57.7

0.32

1.5

69.48

41.9

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176