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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_11647_11999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11647 - 11999

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CTCTTGTCATTC

Flanking Amino Acid:

TGFLQPCEAMAQEWTFTPDK

Intron Amino Acid Position:

840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.5

29.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

79.4

0.66

0.9

70.2

40.1

Minor 5ss

35.2

-1.7

2.8

38.4

40.8

Minor BPS

40.1

-0.7

2.2

42.3

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176

ENSAPLT00000030526

4215 - 23356

19142