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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_12153_12463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12153 - 12463

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TAACACTCACCT

Flanking Amino Acid:

VGEGALGTIRAQQEHLDLGN

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

38.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

71.1

0.48

60.8

44.7

Minor 5ss

32.1

-2

3.1

34.7

41.5

Minor BPS

46.4

-0.1

65.54

43.9

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041661

3181 - 23356

20176

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217