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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_14454_14801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14454 - 14801

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGGCA

5'SS Class:

major

3'SS Sequence:

CTTGTGCTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TTCTCTTTCTCC

Flanking Amino Acid:

GQEECVQLSHRHDFVGTDHL

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

64.7

34.9

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

64.9

0.34

58.2

43.1

Minor 5ss

24.1

-3

3.2

30.2

42.9

Minor BPS

43.8

-0.4

3.6

69.42

42.8

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041661

3181 - 23356

20176

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217