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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_14869_17076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14869 - 17076

Intron Length:

2208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

CTCCCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

TTTGTGAGAAAG

Flanking Amino Acid:

LKASYGHEILLNFRGVTVTQ

Intron Amino Acid Position:

1189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

62.2

43.7

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

74.6

0.55

0.8

68.4

31.8

Minor 5ss

30.2

-2.3

3.2

35.3

42.3

Minor BPS

38.2

-1

2.3

49.91

43.8

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176