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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_17188_17942_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17188 - 17942

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TGATTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

CGAGCTATGATT

Flanking Amino Acid:

AIGTSYPPTQVYELYNGGSM

Intron Amino Acid Position:

1226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

81.3

32.8

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

76.3

0.59

0.9

66.9

40.3

Minor 5ss

38.5

-1.3

51.2

45.7

Minor BPS

45.5

-0.2

1.6

56.69

40.4

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041661

3181 - 23356

20176

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217