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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_18135_18734_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18135 - 18734

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGCCC

5'SS Class:

major

3'SS Sequence:

CTGTCCAAGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATCC

Flanking Amino Acid:

FSPLEARTYSVEVPIHILGG

Intron Amino Acid Position:

1290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

62.2

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

59.6

0.22

1.1

55.5

39.1

Minor 5ss

32.5

-2

3.3

44.2

43.2

Minor BPS

60.1

0.3

1.6

67.69

38.4

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176