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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_19497_19944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19497 - 19944

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCAAAT

U12 Branch Point Sequence:

GAGAACCAAATT

Flanking Amino Acid:

WKTSNVKESGALQIAPEQGV

Intron Amino Acid Position:

1391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

55.9

0.15

61.2

32.6

Major PPT

83.7

0.76

0.8

77.2

37.1

Minor 5ss

30.1

-2.3

2.9

41.8

Minor BPS

40.3

-0.6

52.64

41.8

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176