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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_20062_20130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20062 - 20130

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

GCTCCCGCAGCC

Flanking Amino Acid:

SLCSMDLVCEVHSQEALHQH

Intron Amino Acid Position:

1430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

79.7

0.67

0.8

77.1

31.6

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

41.7

-0.6

2.3

53.01

44.1

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176

ENSAPLT00000030526

4215 - 23356

19142