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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_21480_21580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21480 - 21580

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TTTTCTGGGACT

Flanking Amino Acid:

IVTDVLAGVLSGLLENSQFQ

Intron Amino Acid Position:

1616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

73.1

0.57

71.9

31.3

Major PPT

84.2

0.77

0.7

31.8

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

55.3

0.25

2.2

83.62

37.6

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176