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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_21878_22021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21878 - 22021

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

GGATGCCCATCC

Flanking Amino Acid:

QLREQKEMLSRHPAFGTLVE

Intron Amino Acid Position:

1715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.6

33.8

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

79.5

0.66

0.8

70.1

36.5

Minor 5ss

28.1

-2.5

34.6

41.4

Minor BPS

37.6

-0.9

2.2

46.27

41.8

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176