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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_22160_23109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22160 - 23109

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCAGAG

5'SS Class:

major

3'SS Sequence:

GTTCCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CGTTTCTGAGCC

Flanking Amino Acid:

VIALPPSPFRSRPFPPFPAP

Intron Amino Acid Position:

1886

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.2

56.9

42.6

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

83.1

0.75

0.8

31.6

Minor 5ss

33.9

-1.8

3.6

46.1

49.1

Minor BPS

52.4

0.06

1.7

63.67

41.7

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000041661

3181 - 23356

20176