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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015510.1_9424_9556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9424 - 9556

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAG

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

RRVVCLVHHQEPLYVDFFGT

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.7

37.6

Major BPS

53.4

0.08

1.7

72.5

43.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

35.9

-1.6

3.3

46.1

49.1

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

CFAP65

Ensembl Gene ID:

ENSAPLG00000012800

Chromosome:

PEDO01015510.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030526

4215 - 23356

19142

ENSAPLT00000022770

3181 - 23356

20176

ENSAPLT00000013334

4215 - 22431

18217

ENSAPLT00000041661

3181 - 23356

20176