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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015532.1_2919_3195_R

Intron Information:

Intron Rank:

140572

Intron Class:

major

Intron Phase:

Intron Coordinates:

2919 - 3195

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCTGCTCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.7

43.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

43.2

-0.7

2.9

55.9

48.3

Minor BPS

45.6

-0.3

2.2

58.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022978

Chromosome:

PEDO01015532.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036816

34 - 4224

4191

ENSAPLT00000033246

1048 - 4224

3177