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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015554.1_224_344_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

224 - 344

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGTGGAG

5'SS Class:

weak_major

3'SS Sequence:

GGTGGTGCCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

CCTGCAGTACCG

Flanking Amino Acid:

VDTSPLLKVGAAVPHGFWGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.1

43.7

39.8

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

44.8

-0.3

1.7

42.4

43.2

Minor 5ss

21.4

-3.3

3.4

38.2

Minor BPS

38.2

-1

2.4

43.33

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031181

Chromosome:

PEDO01015554.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022572

114 - 932

819