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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015556.1_380_711_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

380 - 711

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGTCCCCA

5'SS Class:

weak_major

3'SS Sequence:

GACGCTACCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTACCAC

U12 Branch Point Sequence:

TGTACCACCACC

Flanking Amino Acid:

VTLGGVMEPLGRTRWWRRWH

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.2

42.1

40.8

Major BPS

45.2

-0.3

1.4

52.5

42.7

Major PPT

44.6

-0.3

1.6

39.7

38.8

Minor 5ss

43.9

-0.7

2.8

48.2

47.5

Minor BPS

44.9

-0.4

2.2

61.67

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018364

Chromosome:

PEDO01015556.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029812

150 - 1048

899