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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015558.1_4294_6738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4294 - 6738

Intron Length:

2445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTGTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TCCCCCCAAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.5

30.5

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

85.5

0.8

0.9

84.6

Minor 5ss

33.1

-1.9

42.8

44.4

Minor BPS

47.6

-0.1

65.6

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029429

Chromosome:

PEDO01015558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027141

3869 - 15268

11400