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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015573.1_3009_3101_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3009 - 3101

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCATGAGGA

5'SS Class:

weak_major

3'SS Sequence:

CTCTCTTCCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

AATAATCTATCT

Flanking Amino Acid:

VSPAVNPVIYIISN*

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.4

51.4

42.5

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

68.2

0.41

Minor 5ss

27.8

-2.6

4.2

42.8

45.4

Minor BPS

43.6

-0.4

62.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020772

Chromosome:

PEDO01015573.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028592

2144 - 3115

972