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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015591.1_18572_18841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18572 - 18841

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

GATGACCGAGCT

Flanking Amino Acid:

IEPKTRPRSTGDPVKLYQVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

0.61

0.7

68.9

31.6

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

39.7

-0.7

2.1

57.3

44.2

Associated Gene:

Gene:

PCYOX1

Ensembl Gene ID:

ENSAPLG00000025043

Chromosome:

PEDO01015591.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032831

17268 - 19512

2245