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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015591.1_18995_19359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18995 - 19359

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TGCTGGATAAGT

Flanking Amino Acid:

GQGVNINGFVGAVSLAGAGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

81.3

32.8

Major BPS

76.8

0.67

40.9

Major PPT

76.4

0.59

0.9

70.3

36.3

Minor 5ss

31.8

-2.1

3.6

48.2

47.9

Minor BPS

39.3

-0.7

2.6

48.3

Associated Gene:

Gene:

PCYOX1

Ensembl Gene ID:

ENSAPLG00000025043

Chromosome:

PEDO01015591.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032831

17268 - 19512

2245