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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015609.1_2082_3052_R

Intron Information:

Intron Rank:

155345

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2082 - 3052

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGGGGTTA

5'SS Class:

weak_major

3'SS Sequence:

CCCTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

CCCCCCTCAGTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.1

57.4

37.8

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

86.6

0.82

0.7

79.3

32.7

Minor 5ss

-1.6

3.7

51.2

Minor BPS

43.3

-0.6

1.8

40.49

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031072

Chromosome:

PEDO01015609.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031829

21 - 3456

3436