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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015624.1_21173_22886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21173 - 22886

Intron Length:

1714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

GGGACCCTGATG

Flanking Amino Acid:

DAWKAKDFAGCRASNIVRME

Intron Amino Acid Position:

1663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.6

30.3

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

81.5

0.71

0.8

73.1

37.3

Minor 5ss

27.7

-2.6

31.2

36.9

Minor BPS

45.5

-0.4

1.7

45.66

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028134

Chromosome:

PEDO01015624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027178

20940 - 34782

13843