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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015624.1_23794_23964_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23794 - 23964

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTGCC

5'SS Class:

major

3'SS Sequence:

CAACTGGTTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCCCAA

U12 Branch Point Sequence:

GGTCGCCCAACT

Flanking Amino Acid:

CEATRCPPDEVVVEVSECRD

Intron Amino Acid Position:

1531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.3

67.6

39.2

Major BPS

44.3

-0.3

1.2

47.8

37.7

Major PPT

0.07

1.2

48.2

43.6

Minor 5ss

35.5

-1.7

45.1

Minor BPS

44.1

-0.3

2.2

64.74

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028134

Chromosome:

PEDO01015624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027178

20940 - 34782

13843