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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015624.1_26028_26950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26028 - 26950

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATCCATATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

CCATCCATATCT

Flanking Amino Acid:

MERGRKWEVMVDGEHFTLPL

Intron Amino Acid Position:

1240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

0.45

0.9

66.3

38.5

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

51.8

0.13

1.9

69.6

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028134

Chromosome:

PEDO01015624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027178

20940 - 34782

13843