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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015624.1_32166_32697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32166 - 32697

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CAATTTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

CCGTGATTAATT

Flanking Amino Acid:

SYGLVAVCDSDPCRAMKCRT

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

0.6

1.2

75.9

36.3

Major PPT

75.6

0.58

0.9

66.4

40.2

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

48.7

-0

2.1

64.19

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028134

Chromosome:

PEDO01015624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027178

20940 - 34782

13843