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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015624.1_8993_9552_R

Intron Information:

Intron Rank:

132926

Intron Class:

major

Intron Phase:

Intron Coordinates:

8993 - 9552

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTGGTTTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

69.4

36.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.6

0.78

0.8

77.5

36.5

Minor 5ss

29.2

-2.4

2.7

30.5

36.3

Minor BPS

47.1

-0.2

1.6

52.27

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018733

Chromosome:

PEDO01015624.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044810

21 - 10273

10253

ENSAPLT00000041275

21 - 9692

9672