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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015632.1_6809_6911_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6809 - 6911

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

GTGACACCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

TGGTGGTGACAC

Flanking Amino Acid:

HDVVPEHVFKETLSQTEREG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

52.1

0.05

1.2

37.5

Major PPT

54.8

0.11

1.1

40.5

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

34.8

-1.1

2.4

44.86

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027442

Chromosome:

PEDO01015632.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041473

6668 - 9666

2999