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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015649.1_3476_5281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3476 - 5281

Intron Length:

1806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GGTGCCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TCATGCTGATTT

Flanking Amino Acid:

LTIMLQLFDEGRLTDGKGKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

66.6

0.37

57.9

43.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

46.6

-0.1

2.1

65.33

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016987

Chromosome:

PEDO01015649.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040214

44 - 5583

5540