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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015653.1_8239_8322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8239 - 8322

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACACAC

U12 Branch Point Sequence:

CACACCGCAACG

Flanking Amino Acid:

VERAGRLHLVASPQKDISRR

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

41.1

Major BPS

49.1

-0

0.9

56.3

29.4

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

35.8

-1.6

3.3

43.3

45.4

Minor BPS

42.6

-0.7

2.2

45.34

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020432

Chromosome:

PEDO01015653.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043245

3058 - 9811

6754