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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015665.1_165_340_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

165 - 340

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCCGTGAG

5'SS Class:

major

3'SS Sequence:

ACCAAGTTGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GTAGCTGTAACC

Flanking Amino Acid:

GKGRRFCSPLGGLCLLLSAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

57.3

44.2

Major BPS

62.2

0.3

1.2

38.7

Major PPT

44.2

-0.3

1.7

44.9

Minor 5ss

16.2

-3.9

3.5

19.3

31.8

Minor BPS

49.7

-0

2.1

63.51

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021426

Chromosome:

PEDO01015665.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039876

57 - 3317

3261

ENSAPLT00000039653

57 - 2122

2066