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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015665.1_522_2087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

522 - 2087

Intron Length:

1566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTAATATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTGTTCTTAATA

Flanking Amino Acid:

WKNKIWPEIGVARPDDLDNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

82.3

32.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.8

0.54

0.9

70.7

39.4

Minor 5ss

40.5

-1.1

2.8

44.2

Minor BPS

73.8

0.74

1.2

74.21

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021426

Chromosome:

PEDO01015665.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039653

57 - 2122

2066