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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015683.1_3743_4138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3743 - 4138

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

TGTTGGTCACAT

Flanking Amino Acid:

LKWTAFTFLKIPQVLVKLKK

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

59.9

0.25

1.2

38.9

Major PPT

83.9

0.76

0.9

81.2

36.5

Minor 5ss

36.5

-1.5

3.6

48.1

Minor BPS

38.2

-0.8

2.6

62.05

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020572

Chromosome:

PEDO01015683.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045997

535 - 4477

3943