Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01015702.1_286_386_R

Intron Information:

Intron Rank:

136737

Intron Class:

minor

Intron Phase:

Intron Coordinates:

286 - 386

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TAGCGCCACGCAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCCTTAG

U12 Branch Point Sequence:

CTTTCCTTAGCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

54.9

0.12

1.6

53.6

43.8

Major PPT

58.6

0.19

51.2

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

72.1

0.56

1.7

75.34

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021040

Chromosome:

PEDO01015702.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045767

21 - 1201

1181